STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OME79402.1Trk family potassium uptake protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)    
Predicted Functional Partners:
OME79285.1
Potassium uptake system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
OME79368.1
Potassium uptake system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.968
OME77057.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.838
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
  
 
  0.508
OME78940.1
Na+/H+ antiporter subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.455
OME78925.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.418
Your Current Organism:
Paenibacillus pabuli
NCBI taxonomy Id: 1472
Other names: ATCC 43899, Bacillus pabuli, CCUG 27415, CFBP 4262, CIP 103119, DSM 3036, IFO 13638, JCM 9074, LMG 15970, LMG:15970, NBRC 13638, NRRL NRS-924, P. pabuli, Paenibacillus pubuli
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