STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAP37847.1PhzF family phenazine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)    
Predicted Functional Partners:
OAP35844.1
Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.744
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
  0.717
OAP37760.1
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.657
OAP38158.1
Anthranilate synthase; trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.581
OAP43322.1
Allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.563
OAP36360.1
Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.538
OAP43518.1
Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.521
OAP38223.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.521
OAP37848.1
Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I fructose-bisphosphate aldolase family.
  
    0.461
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
    
 0.460
Your Current Organism:
Ensifer glycinis
NCBI taxonomy Id: 1472378
Other names: CCBAU 23380, E. glycinis, Ensifer glycinis Yan et al. 2016, Ensifer sp. CCBAU 23380, Ensifer sp. CCBAU 251168, Ensifer sp. CCBAU 251169, Ensifer sp. CCBAU 251170, HAMBI 3645, LMG 29231, LMG:29231, Sinorhizobium sp. CCBAU 05593, Sinorhizobium sp. CCBAU 05617
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.