STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALX48048.1Stage III sporulation protein AG; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)    
Predicted Functional Partners:
ALX48049.1
Stage III sporulation protein AF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.984
ALX48047.1
Stage III sporulation protein AH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.980
ALX48050.1
Stage III sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.975
ALX48053.1
Stage III sporulation protein AB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
ALX48054.1
Stage III sporulation protein AA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
ALX48051.1
Stage III sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
ALX48052.1
Stage III sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.946
ALX49908.1
Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.810
ALX49432.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.802
ALX47966.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.790
Your Current Organism:
Lentibacillus amyloliquefaciens
NCBI taxonomy Id: 1472767
Other names: ACCC 06401, JCM 19838, L. amyloliquefaciens, Lentibacillus amyloliquefaciens Wang et al. 2016, Lentibacillus sp. LAM0015, strain LAM0015
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