Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALX48694.1 | ALX48740.1 | AOX59_08755 | AOX59_08990 | Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.612 |
| ALX48694.1 | ALX49136.1 | AOX59_08755 | AOX59_11405 | Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma-B factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.675 |
| ALX48694.1 | ALX49138.1 | AOX59_08755 | AOX59_11415 | Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | 0.649 |
| ALX48694.1 | ALX49139.1 | AOX59_08755 | AOX59_11420 | Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.435 |
| ALX48694.1 | ALX49140.1 | AOX59_08755 | AOX59_11425 | Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.469 |
| ALX48694.1 | ALX49141.1 | AOX59_08755 | AOX59_11430 | Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbT antagonist protein RsbS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.606 |
| ALX48694.1 | ALX49142.1 | AOX59_08755 | AOX59_11435 | Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbR protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.622 |
| ALX48694.1 | ALX50620.1 | AOX59_08755 | AOX59_11400 | Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Indirect negative regulator of sigma-B activity; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.496 |
| ALX48694.1 | rsbW | AOX59_08755 | AOX59_11410 | Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anti-sigma B factor RsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B). | 0.710 |
| ALX48740.1 | ALX48694.1 | AOX59_08990 | AOX59_08755 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.612 |
| ALX48740.1 | ALX49138.1 | AOX59_08990 | AOX59_11415 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | 0.424 |
| ALX48740.1 | ALX49141.1 | AOX59_08990 | AOX59_11430 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbT antagonist protein RsbS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.491 |
| ALX48740.1 | ALX49142.1 | AOX59_08990 | AOX59_11435 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbR protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.505 |
| ALX49136.1 | ALX48694.1 | AOX59_11405 | AOX59_08755 | RNA polymerase sigma-B factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.675 |
| ALX49136.1 | ALX49138.1 | AOX59_11405 | AOX59_11415 | RNA polymerase sigma-B factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family. | 0.988 |
| ALX49136.1 | ALX49139.1 | AOX59_11405 | AOX59_11420 | RNA polymerase sigma-B factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.913 |
| ALX49136.1 | ALX49140.1 | AOX59_11405 | AOX59_11425 | RNA polymerase sigma-B factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.825 |
| ALX49136.1 | ALX49141.1 | AOX59_11405 | AOX59_11430 | RNA polymerase sigma-B factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbT antagonist protein RsbS; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.662 |
| ALX49136.1 | ALX49142.1 | AOX59_11405 | AOX59_11435 | RNA polymerase sigma-B factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RsbR protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.676 |
| ALX49136.1 | ALX49143.1 | AOX59_11405 | AOX59_11440 | RNA polymerase sigma-B factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma B is not essential for sporulation; rather it is required for maximal expression of ctc and csbA which are transcribed in the early stationary phase under conditions inimical to sporulation; induced by heat shock, salt stress, oxidative stress, glucose limitation, oxygen limitation and entry into stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology. | PemK family transcriptional regulator; Toxic component of a type II toxin-antitoxin (TA) system. | 0.460 |
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