STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001466305_00248Unannotated protein. (142 aa)    
Predicted Functional Partners:
GCA_001466305_00405
Unannotated protein.
    
  0.726
GCA_001466305_02075
Unannotated protein.
   
    0.616
GCA_001466305_00249
Unannotated protein.
    
  0.583
GCA_001466305_00251
Unannotated protein.
     
 0.472
GCA_001466305_00250
Unannotated protein.
       0.463
GCA_001466305_00252
Unannotated protein.
       0.463
GCA_001466305_00244
Unannotated protein.
   
    0.436
GCA_001466305_00418
Unannotated protein.
   
    0.436
GCA_001466305_00246
Unannotated protein.
       0.406
Your Current Organism:
Defluviitalea phaphyphila
NCBI taxonomy Id: 1473580
Other names: CGMCC 1.5199, D. phaphyphila, Defluviitalea sp. Alg1, JCM 30481, strain Alg1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.