STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001466305_00387Unannotated protein. (439 aa)    
Predicted Functional Partners:
GCA_001466305_00227
Unannotated protein.
   
 
  0.737
GCA_001466305_00223
Unannotated protein.
    
  0.653
GCA_001466305_02142
Unannotated protein.
 
     0.652
GCA_001466305_01717
Unannotated protein.
   
   0.638
GCA_001466305_02421
Unannotated protein.
  
   
 0.525
GCA_001466305_02353
Unannotated protein.
   
    0.515
GCA_001466305_00388
Unannotated protein.
  
    0.490
GCA_001466305_01727
Unannotated protein.
  
  
 0.471
GCA_001466305_00386
Unannotated protein.
     
 0.441
GCA_001466305_00385
Unannotated protein.
       0.421
Your Current Organism:
Defluviitalea phaphyphila
NCBI taxonomy Id: 1473580
Other names: CGMCC 1.5199, D. phaphyphila, Defluviitalea sp. Alg1, JCM 30481, strain Alg1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.