STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001466305_01967Unannotated protein. (232 aa)    
Predicted Functional Partners:
GCA_001466305_00057
Unannotated protein.
 
 0.993
GCA_001466305_00075
Unannotated protein.
    
  0.744
GCA_001466305_00452
Unannotated protein.
    
  0.740
GCA_001466305_01335
Unannotated protein.
      0.739
GCA_001466305_01135
Unannotated protein.
    
  0.727
GCA_001466305_00143
Unannotated protein.
    
  0.698
GCA_001466305_00147
Unannotated protein.
    
  0.698
GCA_001466305_00321
Unannotated protein.
    
 0.691
GCA_001466305_01310
Unannotated protein.
    
 0.691
GCA_001466305_01966
Unannotated protein.
       0.664
Your Current Organism:
Defluviitalea phaphyphila
NCBI taxonomy Id: 1473580
Other names: CGMCC 1.5199, D. phaphyphila, Defluviitalea sp. Alg1, JCM 30481, strain Alg1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.