STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cotJCSpore coat protein CotJC; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)    
Predicted Functional Partners:
AQR79342.1
Spore coat protein CotJB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.981
AQR79341.1
Spore coat protein CotJA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.936
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.631
spoVAC
Stage V sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.571
spoVAD
Stage V sporulation protein AD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.567
AQR79337.1
Radical SAM/CxCxxxxC motif protein YfkAB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.556
splG
Spore photoproduct lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.549
sasPA_2
Spore protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.469
AQR79702.1
YlmC/YmxH family sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.431
AQR79723.1
Stage V sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.431
Your Current Organism:
Paenibacillus larvae
NCBI taxonomy Id: 147375
Other names: P. larvae subsp. larvae, Paenibacillus larvae subsp. larvae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.