STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBSD_n0154Unannotated protein. (543 aa)    
Predicted Functional Partners:
MBSD_2587
Unannotated protein; Belongs to the anti-sigma-factor antagonist family.
 
 0.999
MBSD_2041
Unannotated protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.999
MBSD_n0537
Unannotated protein.
   
    0.999
MBSD_n0538
Unannotated protein; Belongs to the flagella basal body rod proteins family.
   
    0.999
MBSD_n0550
Unannotated protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
    0.999
MBSD_n1481
Unannotated protein.
  
 0.999
GCA_000953855_02647
Unannotated protein.
 
 0.999
flgH
Unannotated protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.997
MBSD_n1478
Unannotated protein.
  
 0.995
MBSD_2026
Unannotated protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
    0.993
Your Current Organism:
Mizugakiibacter sediminis
NCBI taxonomy Id: 1475481
Other names: DSM 27098, M. sediminis, Mizugakiibacter sediminis Kojima et al. 2014, NBRC 109608, Xanthomonadaceae bacterium skMP5, strain skMP5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.