STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBSD_n1601Unannotated protein. (242 aa)    
Predicted Functional Partners:
MBSD_n1602
Unannotated protein.
 
 
 0.993
MBSD_1195
Unannotated protein.
 
    0.955
MBSD_1192
Unannotated protein.
 
    0.953
MBSD_1188
Unannotated protein.
  
    0.802
MBSD_1208
Unannotated protein.
 
     0.801
MBSD_1207
Unannotated protein.
 
     0.799
MBSD_n1578
Unannotated protein.
 
     0.792
MBSD_1212
Unannotated protein.
 
     0.783
MBSD_1210
Unannotated protein.
 
     0.783
MBSD_1213
Unannotated protein.
 
    0.778
Your Current Organism:
Mizugakiibacter sediminis
NCBI taxonomy Id: 1475481
Other names: DSM 27098, M. sediminis, Mizugakiibacter sediminis Kojima et al. 2014, NBRC 109608, Xanthomonadaceae bacterium skMP5, strain skMP5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.