STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJA06297.1Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)    
Predicted Functional Partners:
AJA06425.1
DNA polymerase III subunits gamma and tau; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.997
dnaE
DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.997
AJA06335.1
Primosomal protein N; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.957
AJA06289.1
Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.891
AJA06296.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.878
AJA06381.1
Ribonuclease H; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.840
AJA06298.1
30S ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.830
AJA06390.1
DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.803
AJA06424.1
DNA helicase; Unwinds double stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.794
AJA06571.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.770
Your Current Organism:
Saccharibacteria TM7x
NCBI taxonomy Id: 1476577
Other names: C. Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria oral taxon TM7x
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