STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJA06298.130S ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology. (65 aa)    
Predicted Functional Partners:
AJA06290.1
30S ribosomal protein S20; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
AJA06292.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
AJA06296.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06319.1
50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06338.1
30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
AJA06348.1
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06357.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
AJA06375.1
50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06429.1
50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
Your Current Organism:
Saccharibacteria TM7x
NCBI taxonomy Id: 1476577
Other names: C. Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria oral taxon TM7x
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.