STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJA06391.1DNA processing protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)    
Predicted Functional Partners:
AJA06390.1
DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.936
AJA06321.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.845
AJA06683.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.701
AJA06709.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.677
AJA06774.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.666
AJA06911.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.625
AJA06606.1
Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.567
AJA06401.1
glutamyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.506
AJA06297.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.502
rnhB
RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.494
Your Current Organism:
Saccharibacteria TM7x
NCBI taxonomy Id: 1476577
Other names: C. Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria oral taxon TM7x
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.