STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tufElongation factor Tu; EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)    
Predicted Functional Partners:
tsf
EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
AJA06434.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06451.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06453.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06454.1
30S ribosomal protein S11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06455.1
30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06460.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06461.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06463.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
AJA06470.1
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
Your Current Organism:
Saccharibacteria TM7x
NCBI taxonomy Id: 1476577
Other names: C. Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria oral taxon TM7x
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.