STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJA06552.1tRNA (guanine-N1)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)    
Predicted Functional Partners:
AJA06521.1
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.921
rpsP
30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.870
rplB
50S ribosomal protein L2; One of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.832
AJA06481.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.811
AJA06459.1
Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.808
AJA06483.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.752
AJA06480.1
50S ribosomal protein L25; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.739
AJA06453.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.702
AJA06296.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.693
AJA06482.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.688
Your Current Organism:
Saccharibacteria TM7x
NCBI taxonomy Id: 1476577
Other names: C. Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria oral taxon TM7x
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.