STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJA06645.1DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1044 aa)    
Predicted Functional Partners:
AJA06648.1
N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.928
AJA06441.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.890
AJA06644.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.768
AJA06941.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.603
AJA06442.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.582
AJA06444.1
tRNA isopentenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.582
AJA06646.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.547
AJA06939.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.546
AJA06928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.421
Your Current Organism:
Saccharibacteria TM7x
NCBI taxonomy Id: 1476577
Other names: C. Saccharibacteria oral taxon TM7x, Candidatus Saccharibacteria oral taxon TM7x
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.