STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydDABC membrane transporter ATP-binding protein. (575 aa)    
Predicted Functional Partners:
cydC
ABC transporter ATP-binding protein.
 
 
0.998
cydB
Cytochrome bd ubiquinol oxidase subunit II.
 
  
 0.987
cydA
Cytochrome bd ubiquinol oxidase subunit I.
 
  
 0.977
ythA
Cytochrome d oxidase subunit.
 
  
 0.825
CEG26653.1
Cytochrome bd ubiquinol oxidase subunit I.
 
  
 0.807
CEG26654.1
Cytochrome bd-type quinol oxidase subunit 2-like protein.
  
  
 0.757
CEG28297.1
Cytochrome d ubiquinol oxidase subunit II.
  
  
 0.757
CEG28412.1
NADH dehydrogenase.
 
   
 0.591
ybaN
Inner membrane protein YbaN.
    
  0.577
menH
Menaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
 
   
 0.564
Your Current Organism:
Bacillus sp. Bjedd
NCBI taxonomy Id: 1476857
Other names: B. sp. B-jedd, Bacillus sp. B-jedd
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