STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEG27546.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
CEG27544.1
degV family protein.
       0.671
CEG27545.1
Hypothetical protein.
       0.671
CEG27543.1
Cytochrome c oxidase Cu(A) center assembly protein.
       0.435
hypE
Hydrogenase expression/formation protein HypE.
       0.423
hypD
Hydrogenase expression/formation protein HypD.
       0.423
hypC
Ni-Fe hydrogenase maturation protein HypC.
       0.423
hypF
[NiFe] hydrogenase maturation protein HypF.
       0.423
hypB
Hydrogenase nickel incorporation protein HypB.
       0.423
hypA
Hydrogenase nickel incorporation protein HypA.
       0.423
CEG27553.1
Hypothetical protein.
       0.423
Your Current Organism:
Bacillus sp. Bjedd
NCBI taxonomy Id: 1476857
Other names: B. sp. B-jedd, Bacillus sp. B-jedd
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.