STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhgDTranscriptional regulator. (192 aa)    
Predicted Functional Partners:
CEG29621.1
ABC-2 type transporter.
 
  
 0.878
racA
Polar chromosome segregation protein; Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure; Belongs to the RacA family.
  
     0.491
CEG29759.1
MmpL family transporter.
 
    0.477
CEG25289.1
KINB signaling pathway activation protein.
  
     0.459
CEG27471.1
Sporulation kinase.
      
 0.457
CEG26977.1
MMPL domain-containing protein.
 
    0.425
Your Current Organism:
Bacillus sp. Bjedd
NCBI taxonomy Id: 1476857
Other names: B. sp. B-jedd, Bacillus sp. B-jedd
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