STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001659685_04131Unannotated protein. (339 aa)    
Predicted Functional Partners:
GCA_001659685_03147
Unannotated protein.
  
 0.988
GCA_001659685_04367
Unannotated protein.
 
 0.968
GCA_001659685_00825
Unannotated protein.
 
 
 0.925
GCA_001659685_01534
Unannotated protein.
 
 
 0.925
GCA_001659685_01054
Unannotated protein.
 
  
 0.730
GCA_001659685_02760
Unannotated protein.
 
    0.645
GCA_001659685_00399
Unannotated protein.
    
 0.638
GCA_001659685_00626
Unannotated protein.
    
 0.628
GCA_001659685_01127
Unannotated protein.
  
   
 0.586
GCA_001659685_04130
Unannotated protein.
       0.571
Your Current Organism:
Labilibacter marinus
NCBI taxonomy Id: 1477105
Other names: Bacteroidetes bacterium Y11, CICC 10837, KCTC 42400, L. marinus, Labilibacter marina, Labilibacter marinus (Liu et al. 2015) Lu et al. 2017, Saccharicrinis marinus, Saccharicrinis marinus Liu et al. 2015, strain Y11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.