STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ97348.1Planctomycete cytochrome C. (136 aa)    
Predicted Functional Partners:
SFH73823.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
 0.997
SFI12215.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 0.991
SFJ99221.1
Protein of unknown function.
 
     0.975
SFI15365.1
Hypothetical protein.
 
  0.890
SFI15217.1
Putative membrane-bound dehydrogenase domain-containing protein.
 
 
 0.828
SFI74215.1
Glycine/D-amino acid oxidase.
   
 0.810
SFI53402.1
Uncharacterized membrane protein.
 
     0.783
SFJ91496.1
Cytochrome c.
 
 
 0.782
SFJ97685.1
Chitobiase/beta-hexosaminidase C-terminal domain-containing protein.
 
     0.782
SFI53359.1
Protein of unknown function.
  
     0.774
Your Current Organism:
Parapedobacter indicus
NCBI taxonomy Id: 1477437
Other names: DSM 28470, MCC 2546, Parapedobacter indicus Kumar et al. 2015, Parapedobacter sp. RK1, strain RK1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.