Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMM92569.1 | AMM92570.1 | UP17_08445 | UP17_08450 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.780 |
| AMM92570.1 | AMM92569.1 | UP17_08450 | UP17_08445 | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.780 |
| AMM92570.1 | AMM93391.1 | UP17_08450 | UP17_13620 | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.522 |
| AMM92570.1 | AMM94298.1 | UP17_08450 | UP17_18875 | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.448 |
| AMM92570.1 | AMM94900.1 | UP17_08450 | UP17_22655 | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
| AMM92570.1 | rpoA | UP17_08450 | UP17_00820 | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.571 |
| AMM92570.1 | rpoB | UP17_08450 | UP17_00650 | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.595 |
| AMM92570.1 | rpoC | UP17_08450 | UP17_00655 | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.622 |
| AMM92570.1 | rpoZ | UP17_08450 | UP17_07495 | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.571 |
| AMM92570.1 | rsiV | UP17_08450 | UP17_21850 | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.438 |
| AMM92570.1 | rsiW | UP17_08450 | UP17_00975 | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anti-sigma W factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.543 |
| AMM93391.1 | AMM92570.1 | UP17_13620 | UP17_08450 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.522 |
| AMM93391.1 | rpoA | UP17_13620 | UP17_00820 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.461 |
| AMM93391.1 | rpoB | UP17_13620 | UP17_00650 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.458 |
| AMM93391.1 | rpoC | UP17_13620 | UP17_00655 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.502 |
| AMM93391.1 | rpoZ | UP17_13620 | UP17_07495 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.533 |
| AMM94298.1 | AMM92570.1 | UP17_18875 | UP17_08450 | PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.448 |
| AMM94900.1 | AMM92570.1 | UP17_22655 | UP17_08450 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
| rpoA | AMM92570.1 | UP17_00820 | UP17_08450 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
| rpoA | AMM93391.1 | UP17_00820 | UP17_13620 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.461 |
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