Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_011326ML domain-containing protein. (153 aa)    
Predicted Functional Partners:
CRM22_010970
SSD domain-containing protein.
    
 0.513
CRM22_010806
SSD domain-containing protein.
    
 0.513
CRM22_000836
Uncharacterized protein.
    
 0.513
CRM22_000610
SSD domain-containing protein.
    
 0.423
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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