Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_008636Uncharacterized protein. (242 aa)    
Predicted Functional Partners:
CRM22_007639
Uncharacterized protein.
    
 0.607
CRM22_004436
ANK_REP_REGION domain-containing protein.
    
 0.607
CRM22_010824
Uncharacterized protein.
    
 0.563
CRM22_011322
Ubiquitin-like domain-containing protein.
    
  0.532
CRM22_007767
Ubiquitin-like domain-containing protein.
    
  0.518
CRM22_008317
MPN domain-containing protein.
    
 0.517
CRM22_009776
Uncharacterized protein.
    
 0.507
CRM22_005166
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.495
CRM22_000237
Rhomboid domain-containing protein.
    
 0.446
CRM22_003047
ANK_REP_REGION domain-containing protein.
    
  0.429
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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