STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_009866Nsp1_C domain-containing protein. (556 aa)    
Predicted Functional Partners:
CRM22_005540
Uncharacterized protein.
   
 0.999
CRM22_002334
Nup54 domain-containing protein.
   
 0.994
CRM22_000586
Uncharacterized protein.
   
 0.977
CRM22_007293
Nuclear pore protein.
   
 0.976
CRM22_010114
Nucleoporin_N domain-containing protein.
   
 0.975
CRM22_004999
Uncharacterized protein.
   
 0.973
CRM22_009217
Uncharacterized protein.
   
 0.971
CRM22_008486
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.970
CRM22_004025
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.969
CRM22_000404
Uncharacterized protein.
    
 0.960
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.