Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_007753Uncharacterized protein. (667 aa)    
Predicted Functional Partners:
CRM22_002083
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.987
CRM22_008340
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.956
CRM22_007374
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.956
CRM22_002347
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.956
CRM22_006456
Uncharacterized protein.
   
  
 0.946
CRM22_010939
BUB1 N-terminal domain-containing protein.
   
 0.930
CRM22_005540
Uncharacterized protein.
    
 0.929
CRM22_002235
PH domain-containing protein.
   
 
 0.891
CRM22_001349
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.884
CRM22_006880
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.881
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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