Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_007901TLC domain-containing protein. (432 aa)    
Predicted Functional Partners:
CRM22_005242
Neutral ceramidase.
     
 0.939
CRM22_003203
DAGKc domain-containing protein.
     
 0.924
CRM22_007069
acidPPc domain-containing protein.
    
 0.921
CRM22_005244
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.919
CRM22_006777
Uncharacterized protein.
     
 0.917
CRM22_002802
Lipid_DES domain-containing protein.
    
 0.910
CRM22_001450
Lipid_DES domain-containing protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
    
 0.910
CRM22_004633
Uncharacterized protein.
     
 0.905
CRM22_009332
Uncharacterized protein.
     
 0.898
CRM22_002750
acidPPc domain-containing protein.
    
 0.898
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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