STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_006678Uncharacterized protein. (603 aa)    
Predicted Functional Partners:
CRM22_010257
Uncharacterized protein.
    
 0.894
CRM22_010456
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.713
CRM22_009942
Uncharacterized protein.
    
  0.713
CRM22_010514
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.699
CRM22_011327
Small nuclear ribonucleoprotein Sm D2.
    
 0.644
CRM22_008778
Small nuclear ribonucleoprotein Sm D3.
    
 0.642
CRM22_004097
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.641
CRM22_004087
Sm domain-containing protein.
    
 0.636
CRM22_006406
Sm domain-containing protein.
    
  0.633
CRM22_008869
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.627
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.