Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_006409PDZ domain-containing protein. (606 aa)    
Predicted Functional Partners:
CRM22_003767
Cytochrome b5 heme-binding domain-containing protein.
     
  0.922
CRM22_009062
Uncharacterized protein.
    
 0.705
CRM22_010456
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.689
CRM22_001473
Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.636
CRM22_002057
PH domain-containing protein.
    
 
 0.635
CRM22_006950
Uncharacterized protein.
    
 0.633
CRM22_009746
Uncharacterized protein.
    
 0.630
CRM22_010824
Uncharacterized protein.
    
 0.617
CRM22_007080
Uncharacterized protein.
    
 0.610
CRM22_009301
Uncharacterized protein.
    
 0.609
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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