STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_008026Uncharacterized protein. (2796 aa)    
Predicted Functional Partners:
CRM22_010824
Uncharacterized protein.
    
 0.864
CRM22_008528
SET domain-containing protein.
    
  0.737
CRM22_008686
RPA_C domain-containing protein.
    
  0.597
CRM22_006640
OB domain-containing protein.
    
  0.597
CRM22_003590
SAS-6_N domain-containing protein.
    
  0.597
CRM22_008052
Uncharacterized protein.
    
 0.587
CRM22_006039
Ephrin_rec_like domain-containing protein.
    
 0.587
CRM22_005592
Uncharacterized protein.
    
 0.587
CRM22_005662
Uncharacterized protein.
    
 0.587
CRM22_005971
Uncharacterized protein.
    
  0.580
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.