STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_005707CSD_1 domain-containing protein. (504 aa)    
Predicted Functional Partners:
CRM22_004997
Uncharacterized protein.
    
 0.749
CRM22_008701
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 
 0.722
CRM22_011081
Uncharacterized protein.
    
 0.692
CRM22_011097
Uncharacterized protein.
    
 0.690
CRM22_008778
Small nuclear ribonucleoprotein Sm D3.
   
 0.690
CRM22_006406
Sm domain-containing protein.
    
  0.690
CRM22_006534
Nuclear cap-binding protein subunit 2.
   
  0.685
CRM22_004748
Uncharacterized protein.
    
 0.684
CRM22_008076
Small nuclear ribonucleoprotein G.
    
  0.683
CRM22_011259
Uncharacterized protein.
    
 0.670
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.