STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_005480Uncharacterized protein. (869 aa)    
Predicted Functional Partners:
CRM22_004330
Uncharacterized protein.
   
 0.999
CRM22_003731
PX domain-containing protein.
   
 0.996
CRM22_010292
Uncharacterized protein.
    
 0.990
CRM22_009508
Uncharacterized protein.
    
 0.988
CRM22_009328
t-SNARE coiled-coil homology domain-containing protein.
    
 0.987
CRM22_001142
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.979
CRM22_010606
Ribosomal protein S6 kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. S6 kinase subfamily.
    
 0.929
CRM22_008587
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.929
CRM22_006017
Uncharacterized protein.
    
 0.929
CRM22_007055
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.863
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.