STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_005426Uncharacterized protein; Belongs to the peptidase C1 family. (270 aa)    
Predicted Functional Partners:
CRM22_003844
Pept_C1 domain-containing protein.
  
 0.629
CRM22_000784
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.624
CRM22_007235
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
 0.581
CRM22_004439
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
 0.580
CRM22_005946
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
 0.576
CRM22_002998
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
 0.565
CRM22_001377
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.557
CRM22_004445
Uncharacterized protein; Belongs to the peptidase C1 family.
  
0.543
CRM22_006933
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
0.529
CRM22_004025
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
  0.515
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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