STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_005155Uncharacterized protein. (318 aa)    
Predicted Functional Partners:
CRM22_002598
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.799
CRM22_008528
SET domain-containing protein.
   
 0.793
CRM22_010156
WD_REPEATS_REGION domain-containing protein.
    
 0.778
CRM22_003149
ANK_REP_REGION domain-containing protein.
    
 0.777
CRM22_001189
Uncharacterized protein.
    
 0.777
CRM22_005151
VEFS-Box domain-containing protein.
    
 0.773
CRM22_006298
WD_REPEATS_REGION domain-containing protein.
    
 0.772
CRM22_003431
B30.2/SPRY domain-containing protein.
    
 0.772
CRM22_007927
P53 domain-containing protein.
    
 0.771
CRM22_000532
Uncharacterized protein.
    
 0.753
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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