Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRM22_000532 | CRM22_001189 | A0A4S2MEX7 | A0A4S2MFY9 | Uncharacterized protein. | Uncharacterized protein. | 0.577 |
CRM22_000532 | CRM22_002598 | A0A4S2MEX7 | A0A4S2LMT2 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.974 |
CRM22_000532 | CRM22_003149 | A0A4S2MEX7 | A0A4S2M8U6 | Uncharacterized protein. | ANK_REP_REGION domain-containing protein. | 0.577 |
CRM22_000532 | CRM22_003431 | A0A4S2MEX7 | A0A4S2M189 | Uncharacterized protein. | B30.2/SPRY domain-containing protein. | 0.980 |
CRM22_000532 | CRM22_005151 | A0A4S2MEX7 | A0A4V3SF31 | Uncharacterized protein. | VEFS-Box domain-containing protein. | 0.909 |
CRM22_000532 | CRM22_005155 | A0A4S2MEX7 | A0A4S2LSJ3 | Uncharacterized protein. | Uncharacterized protein. | 0.753 |
CRM22_000532 | CRM22_006298 | A0A4S2MEX7 | A0A4S2LUE8 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.980 |
CRM22_000532 | CRM22_008528 | A0A4S2MEX7 | A0A4S2LHT2 | Uncharacterized protein. | SET domain-containing protein. | 0.626 |
CRM22_000532 | CRM22_010156 | A0A4S2MEX7 | A0A4S2L114 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.966 |
CRM22_001189 | CRM22_000532 | A0A4S2MFY9 | A0A4S2MEX7 | Uncharacterized protein. | Uncharacterized protein. | 0.577 |
CRM22_001189 | CRM22_002598 | A0A4S2MFY9 | A0A4S2LMT2 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.877 |
CRM22_001189 | CRM22_005151 | A0A4S2MFY9 | A0A4V3SF31 | Uncharacterized protein. | VEFS-Box domain-containing protein. | 0.524 |
CRM22_001189 | CRM22_005155 | A0A4S2MFY9 | A0A4S2LSJ3 | Uncharacterized protein. | Uncharacterized protein. | 0.777 |
CRM22_001189 | CRM22_007927 | A0A4S2MFY9 | A0A4S2LLK3 | Uncharacterized protein. | P53 domain-containing protein. | 0.463 |
CRM22_001189 | CRM22_008528 | A0A4S2MFY9 | A0A4S2LHT2 | Uncharacterized protein. | SET domain-containing protein. | 0.675 |
CRM22_001189 | CRM22_010156 | A0A4S2MFY9 | A0A4S2L114 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.473 |
CRM22_002598 | CRM22_000532 | A0A4S2LMT2 | A0A4S2MEX7 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.974 |
CRM22_002598 | CRM22_001189 | A0A4S2LMT2 | A0A4S2MFY9 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | Uncharacterized protein. | 0.877 |
CRM22_002598 | CRM22_003149 | A0A4S2LMT2 | A0A4S2M8U6 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | ANK_REP_REGION domain-containing protein. | 0.877 |
CRM22_002598 | CRM22_003431 | A0A4S2LMT2 | A0A4S2M189 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | B30.2/SPRY domain-containing protein. | 0.962 |
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