STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_004599Uncharacterized protein. (741 aa)    
Predicted Functional Partners:
CRM22_010054
TOG domain-containing protein.
   
 
 0.982
CRM22_000186
Uncharacterized protein.
   
 
 0.887
CRM22_000906
Uncharacterized protein.
   
 
 0.870
CRM22_010601
Ribosomal_L23eN domain-containing protein.
   
 
 0.869
CRM22_007868
Ribosomal_L18_c domain-containing protein.
  
 
 0.866
CRM22_011252
Uncharacterized protein.
  
 
 0.864
CRM22_002877
Uncharacterized protein.
  
   0.864
CRM22_006764
Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.
   
   0.862
CRM22_010879
Uncharacterized protein.
  
   0.856
CRM22_008552
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.855
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.