STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_005678Vesicle transport protein; May be involved in fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Belongs to the SFT2 family. (158 aa)    
Predicted Functional Partners:
CRM22_001076
Uncharacterized protein.
   
 
 0.644
CRM22_007184
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.576
CRM22_004986
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.576
CRM22_009724
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.562
CRM22_003072
FCP1 homology domain-containing protein.
      
 0.552
CRM22_004251
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.493
CRM22_008418
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.465
CRM22_011000
Uncharacterized protein.
   
 
 0.412
CRM22_000972
Fe2OG dioxygenase domain-containing protein.
      
 0.412
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.