STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_004983Brix domain-containing protein. (294 aa)    
Predicted Functional Partners:
CRM22_007309
Uncharacterized protein.
   
 0.999
CRM22_001928
S4 RNA-binding domain-containing protein.
   
 0.999
CRM22_001195
Uncharacterized protein.
   
 
 0.999
CRM22_008826
Uncharacterized protein.
   
 
 0.998
CRM22_007047
Nucleolar protein 6.
   
 0.998
CRM22_002595
WD_REPEATS_REGION domain-containing protein.
   
 
 0.998
CRM22_000188
WD_REPEATS_REGION domain-containing protein.
   
  0.998
CRM22_003857
Uncharacterized protein.
   
 0.998
CRM22_009984
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
   0.997
CRM22_005055
WD_REPEATS_REGION domain-containing protein.
   
 
 0.997
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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