Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRM22_000870 | CRM22_001694 | A0A4S2MD51 | A0A4S2MFQ9 | Ribosomal_L2_C domain-containing protein. | RPOLD domain-containing protein. | 0.912 |
CRM22_000870 | CRM22_002931 | A0A4S2MD51 | A0A4S2M3L6 | Ribosomal_L2_C domain-containing protein. | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.772 |
CRM22_000870 | CRM22_003070 | A0A4S2MD51 | A0A4V3SG29 | Ribosomal_L2_C domain-containing protein. | RPOLD domain-containing protein. | 0.912 |
CRM22_000870 | CRM22_003774 | A0A4S2MD51 | A0A4S2LZL5 | Ribosomal_L2_C domain-containing protein. | Uncharacterized protein. | 0.512 |
CRM22_000870 | CRM22_005612 | A0A4S2MD51 | A0A4S2LQE7 | Ribosomal_L2_C domain-containing protein. | Uncharacterized protein. | 0.867 |
CRM22_000870 | CRM22_007047 | A0A4S2MD51 | A0A4S2LI15 | Ribosomal_L2_C domain-containing protein. | Nucleolar protein 6. | 0.765 |
CRM22_000870 | CRM22_007666 | A0A4S2MD51 | A0A4S2LGW3 | Ribosomal_L2_C domain-containing protein. | Uncharacterized protein. | 0.717 |
CRM22_000870 | CRM22_010962 | A0A4S2MD51 | A0A4S2KGU5 | Ribosomal_L2_C domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.925 |
CRM22_001694 | CRM22_000870 | A0A4S2MFQ9 | A0A4S2MD51 | RPOLD domain-containing protein. | Ribosomal_L2_C domain-containing protein. | 0.912 |
CRM22_001694 | CRM22_002931 | A0A4S2MFQ9 | A0A4S2M3L6 | RPOLD domain-containing protein. | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.768 |
CRM22_001694 | CRM22_003070 | A0A4S2MFQ9 | A0A4V3SG29 | RPOLD domain-containing protein. | RPOLD domain-containing protein. | 0.787 |
CRM22_001694 | CRM22_003774 | A0A4S2MFQ9 | A0A4S2LZL5 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.999 |
CRM22_001694 | CRM22_005612 | A0A4S2MFQ9 | A0A4S2LQE7 | RPOLD domain-containing protein. | Uncharacterized protein. | 0.999 |
CRM22_001694 | CRM22_007047 | A0A4S2MFQ9 | A0A4S2LI15 | RPOLD domain-containing protein. | Nucleolar protein 6. | 0.499 |
CRM22_001694 | CRM22_007081 | A0A4S2MFQ9 | A0A4S2LI36 | RPOLD domain-containing protein. | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | 0.861 |
CRM22_001694 | CRM22_008164 | A0A4S2MFQ9 | A0A4S2LCU2 | RPOLD domain-containing protein. | RTR1-type domain-containing protein. | 0.940 |
CRM22_001694 | CRM22_010962 | A0A4S2MFQ9 | A0A4S2KGU5 | RPOLD domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.986 |
CRM22_002931 | CRM22_000870 | A0A4S2M3L6 | A0A4S2MD51 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | Ribosomal_L2_C domain-containing protein. | 0.772 |
CRM22_002931 | CRM22_001694 | A0A4S2M3L6 | A0A4S2MFQ9 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RPOLD domain-containing protein. | 0.768 |
CRM22_002931 | CRM22_003070 | A0A4S2M3L6 | A0A4V3SG29 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RPOLD domain-containing protein. | 0.906 |
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