STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_001608Uncharacterized protein. (416 aa)    
Predicted Functional Partners:
CRM22_000716
Uncharacterized protein.
    
 0.900
CRM22_000726
Uncharacterized protein.
    
 0.896
CRM22_000448
Uncharacterized protein; Belongs to the TPP enzyme family.
  
 
 0.857
CRM22_006082
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.854
CRM22_005633
Uncharacterized protein.
    
 0.848
CRM22_001584
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.845
CRM22_009970
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.834
CRM22_008595
Uncharacterized protein.
  
 
 0.832
CRM22_000168
Uncharacterized protein.
  
 
 0.832
CRM22_003376
Uncharacterized protein.
    
 0.829
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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