STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_002300RING-type domain-containing protein. (497 aa)    
Predicted Functional Partners:
CRM22_011322
Ubiquitin-like domain-containing protein.
    
  0.634
CRM22_007767
Ubiquitin-like domain-containing protein.
    
  0.634
CRM22_011038
Uncharacterized protein.
    
 0.631
CRM22_010011
Ubiquitin carboxyl-terminal hydrolase.
    
 0.527
CRM22_004061
Ubiquitin carboxyl-terminal hydrolase.
    
 0.527
CRM22_008781
Clat_adaptor_s domain-containing protein.
    
 
 0.503
CRM22_001390
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.421
CRM22_000504
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.400
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.