STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRM22_001672Uncharacterized protein. (185 aa)    
Predicted Functional Partners:
CRM22_003107
Uncharacterized protein.
    
 0.946
CRM22_005655
Uncharacterized protein.
    
 0.648
CRM22_005342
DIRP domain-containing protein.
    
 0.636
CRM22_008686
RPA_C domain-containing protein.
    
 0.621
CRM22_005216
WSC domain-containing protein.
    
 0.614
CRM22_008829
WD_REPEATS_REGION domain-containing protein.
    
 0.579
CRM22_001187
WD_REPEATS_REGION domain-containing protein.
    
 0.579
CRM22_007541
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.577
CRM22_010593
dUTPase domain-containing protein.
    
  0.556
CRM22_007281
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.556
Your Current Organism:
Opisthorchis felineus
NCBI taxonomy Id: 147828
Other names: O. felineus, cat liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.