Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKP45571.1 | AKP45572.1 | BSM4216_0201 | BSM4216_0202 | Hypothetical protein. | Hypothetical protein. | 0.572 |
AKP45571.1 | AKP45573.1 | BSM4216_0201 | BSM4216_0203 | Hypothetical protein. | RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.773 |
AKP45571.1 | AKP45574.1 | BSM4216_0201 | BSM4216_0204 | Hypothetical protein. | Anti-sigma-W factor RsiW. | 0.714 |
AKP45571.1 | AKP45576.1 | BSM4216_0201 | BSM4216_0206 | Hypothetical protein. | Hypothetical protein. | 0.450 |
AKP45571.1 | dacA | BSM4216_0201 | BSM4216_0205 | Hypothetical protein. | Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.450 |
AKP45572.1 | AKP45571.1 | BSM4216_0202 | BSM4216_0201 | Hypothetical protein. | Hypothetical protein. | 0.572 |
AKP45572.1 | AKP45573.1 | BSM4216_0202 | BSM4216_0203 | Hypothetical protein. | RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.574 |
AKP45572.1 | AKP45574.1 | BSM4216_0202 | BSM4216_0204 | Hypothetical protein. | Anti-sigma-W factor RsiW. | 0.532 |
AKP45573.1 | AKP45571.1 | BSM4216_0203 | BSM4216_0201 | RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.773 |
AKP45573.1 | AKP45572.1 | BSM4216_0203 | BSM4216_0202 | RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.574 |
AKP45573.1 | AKP45574.1 | BSM4216_0203 | BSM4216_0204 | RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | Anti-sigma-W factor RsiW. | 0.992 |
AKP45573.1 | AKP45576.1 | BSM4216_0203 | BSM4216_0206 | RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.497 |
AKP45573.1 | dacA | BSM4216_0203 | BSM4216_0205 | RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.497 |
AKP45574.1 | AKP45571.1 | BSM4216_0204 | BSM4216_0201 | Anti-sigma-W factor RsiW. | Hypothetical protein. | 0.714 |
AKP45574.1 | AKP45572.1 | BSM4216_0204 | BSM4216_0202 | Anti-sigma-W factor RsiW. | Hypothetical protein. | 0.532 |
AKP45574.1 | AKP45573.1 | BSM4216_0204 | BSM4216_0203 | Anti-sigma-W factor RsiW. | RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.992 |
AKP45574.1 | AKP45576.1 | BSM4216_0204 | BSM4216_0206 | Anti-sigma-W factor RsiW. | Hypothetical protein. | 0.526 |
AKP45574.1 | dacA | BSM4216_0204 | BSM4216_0205 | Anti-sigma-W factor RsiW. | Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. | 0.526 |
AKP45576.1 | AKP45571.1 | BSM4216_0206 | BSM4216_0201 | Hypothetical protein. | Hypothetical protein. | 0.450 |
AKP45576.1 | AKP45573.1 | BSM4216_0206 | BSM4216_0203 | Hypothetical protein. | RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. | 0.497 |
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