STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP46114.1Hypothetical protein. (59 aa)    
Predicted Functional Partners:
AKP46113.1
Hypothetical protein.
       0.773
AKP47792.1
YqgW.
  
     0.770
AKP48787.1
Hypothetical protein.
  
     0.753
AKP47823.1
HAD-superfamily hydrolase-like protein; Belongs to the 5'(3')-deoxyribonucleotidase family.
  
     0.712
AKP47511.1
Hypothetical protein.
  
     0.703
AKP45873.1
Hypothetical protein.
  
     0.686
BSM4216_0773
Uncharacterized protein.
  
     0.677
AKP46115.1
Fumarate hydratase class Iaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
 
     0.638
AKP46111.1
Hypothetical protein; FIG01226204.
       0.621
AKP45804.1
Putative 3-phenylpropionic acid transporter.
  
     0.619
Your Current Organism:
Bacillus smithii
NCBI taxonomy Id: 1479
Other names: B. smithii, CCUG 27413, CIP 103790, DSM 4216, IFO 15311, JCM 9076, LMG 12526, LMG:12526, NBRC 15311, NRRL NRS-173
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.