STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP46331.1Competence transcription factor. (185 aa)    
Predicted Functional Partners:
AKP46045.1
Competence transcription factor.
  
  
 
0.922
AKP48157.1
Hypothetical protein; Belongs to the UPF0354 family.
  
     0.760
AKP48165.1
Hypothetical protein; FIG01225636.
  
     0.706
AKP47812.1
Hypothetical protein.
  
     0.694
AKP46381.1
Hypothetical protein.
  
     0.692
mecA
Negative regulator of genetic competence MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC.
  
   
 0.684
AKP48211.1
8-oxo-dGTPase Bsu YtkD 8-oxo-GTPase Bsu YtkD; Belongs to the Nudix hydrolase family.
  
     0.680
AKP46421.1
YjbH-likeGTP pyrophosphokinase domain.
  
     0.672
AKP47340.1
Hypothetical protein.
  
     0.661
AKP47811.1
Hypothetical protein.
  
     0.657
Your Current Organism:
Bacillus smithii
NCBI taxonomy Id: 1479
Other names: B. smithii, CCUG 27413, CIP 103790, DSM 4216, IFO 15311, JCM 9076, LMG 12526, LMG:12526, NBRC 15311, NRRL NRS-173
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.