Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKP46045.1 | AKP46332.1 | BSM4216_0707 | BSM4216_1031 | Competence transcription factor. | YhjD. | 0.592 |
AKP46045.1 | AKP46444.1 | BSM4216_0707 | BSM4216_1144 | Competence transcription factor. | Hypothetical protein; FIG01228645. | 0.513 |
AKP46045.1 | AKP47679.1 | BSM4216_0707 | BSM4216_2441 | Competence transcription factor. | Hypothetical protein. | 0.589 |
AKP46045.1 | AKP48377.1 | BSM4216_0707 | BSM4216_3174 | Competence transcription factor. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.539 |
AKP46045.1 | AKP48876.1 | BSM4216_0707 | BSM4216_3721 | Competence transcription factor. | Hypothetical protein. | 0.584 |
AKP46078.1 | AKP46332.1 | BSM4216_0742 | BSM4216_1031 | Stage V sporulation protein B. | YhjD. | 0.684 |
AKP46078.1 | AKP46444.1 | BSM4216_0742 | BSM4216_1144 | Stage V sporulation protein B. | Hypothetical protein; FIG01228645. | 0.595 |
AKP46078.1 | AKP47232.1 | BSM4216_0742 | BSM4216_1975 | Stage V sporulation protein B. | Hypothetical protein. | 0.632 |
AKP46078.1 | AKP47679.1 | BSM4216_0742 | BSM4216_2441 | Stage V sporulation protein B. | Hypothetical protein. | 0.670 |
AKP46078.1 | AKP47830.1 | BSM4216_0742 | BSM4216_2595 | Stage V sporulation protein B. | Hypothetical protein. | 0.423 |
AKP46078.1 | AKP48424.1 | BSM4216_0742 | BSM4216_3229 | Stage V sporulation protein B. | Hypothetical protein; FIG01226141. | 0.405 |
AKP46332.1 | AKP46045.1 | BSM4216_1031 | BSM4216_0707 | YhjD. | Competence transcription factor. | 0.592 |
AKP46332.1 | AKP46078.1 | BSM4216_1031 | BSM4216_0742 | YhjD. | Stage V sporulation protein B. | 0.684 |
AKP46332.1 | AKP46444.1 | BSM4216_1031 | BSM4216_1144 | YhjD. | Hypothetical protein; FIG01228645. | 0.581 |
AKP46332.1 | AKP47232.1 | BSM4216_1031 | BSM4216_1975 | YhjD. | Hypothetical protein. | 0.577 |
AKP46332.1 | AKP47679.1 | BSM4216_1031 | BSM4216_2441 | YhjD. | Hypothetical protein. | 0.790 |
AKP46332.1 | AKP47830.1 | BSM4216_1031 | BSM4216_2595 | YhjD. | Hypothetical protein. | 0.637 |
AKP46332.1 | AKP48377.1 | BSM4216_1031 | BSM4216_3174 | YhjD. | RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. | 0.604 |
AKP46332.1 | AKP48424.1 | BSM4216_1031 | BSM4216_3229 | YhjD. | Hypothetical protein; FIG01226141. | 0.640 |
AKP46332.1 | AKP48703.1 | BSM4216_1031 | BSM4216_3543 | YhjD. | Hypothetical protein. | 0.584 |
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