Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKP45436.1 | mecA | BSM4216_0037 | BSM4216_1113 | DNA replication initiation control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family. | Negative regulator of genetic competence MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | 0.651 |
| AKP45491.1 | mecA | BSM4216_0108 | BSM4216_1113 | ATP-binding subunit ClpC Negative regulator of genetic competence clcC/mecB; Belongs to the ClpA/ClpB family. | Negative regulator of genetic competence MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | 0.824 |
| AKP46331.1 | AKP46421.1 | BSM4216_1030 | BSM4216_1121 | Competence transcription factor. | YjbH-likeGTP pyrophosphokinase domain. | 0.672 |
| AKP46331.1 | AKP48157.1 | BSM4216_1030 | BSM4216_2925 | Competence transcription factor. | Hypothetical protein; Belongs to the UPF0354 family. | 0.760 |
| AKP46331.1 | AKP48211.1 | BSM4216_1030 | BSM4216_2979 | Competence transcription factor. | 8-oxo-dGTPase Bsu YtkD 8-oxo-GTPase Bsu YtkD; Belongs to the Nudix hydrolase family. | 0.680 |
| AKP46331.1 | ezrA | BSM4216_1030 | BSM4216_2899 | Competence transcription factor. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.579 |
| AKP46331.1 | mecA | BSM4216_1030 | BSM4216_1113 | Competence transcription factor. | Negative regulator of genetic competence MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | 0.684 |
| AKP46414.1 | AKP48157.1 | BSM4216_1114 | BSM4216_2925 | Competence protein CoiA. | Hypothetical protein; Belongs to the UPF0354 family. | 0.404 |
| AKP46414.1 | ezrA | BSM4216_1114 | BSM4216_2899 | Competence protein CoiA. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.755 |
| AKP46414.1 | mecA | BSM4216_1114 | BSM4216_1113 | Competence protein CoiA. | Negative regulator of genetic competence MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | 0.720 |
| AKP46421.1 | AKP46331.1 | BSM4216_1121 | BSM4216_1030 | YjbH-likeGTP pyrophosphokinase domain. | Competence transcription factor. | 0.672 |
| AKP46421.1 | AKP48157.1 | BSM4216_1121 | BSM4216_2925 | YjbH-likeGTP pyrophosphokinase domain. | Hypothetical protein; Belongs to the UPF0354 family. | 0.727 |
| AKP46421.1 | AKP48211.1 | BSM4216_1121 | BSM4216_2979 | YjbH-likeGTP pyrophosphokinase domain. | 8-oxo-dGTPase Bsu YtkD 8-oxo-GTPase Bsu YtkD; Belongs to the Nudix hydrolase family. | 0.725 |
| AKP46421.1 | ezrA | BSM4216_1121 | BSM4216_2899 | YjbH-likeGTP pyrophosphokinase domain. | Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family. | 0.644 |
| AKP46421.1 | mecA | BSM4216_1121 | BSM4216_1113 | YjbH-likeGTP pyrophosphokinase domain. | Negative regulator of genetic competence MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | 0.686 |
| AKP46643.1 | mecA | BSM4216_1362 | BSM4216_1113 | ClpB protein; Belongs to the ClpA/ClpB family. | Negative regulator of genetic competence MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC. | 0.758 |
| AKP48157.1 | AKP46331.1 | BSM4216_2925 | BSM4216_1030 | Hypothetical protein; Belongs to the UPF0354 family. | Competence transcription factor. | 0.760 |
| AKP48157.1 | AKP46414.1 | BSM4216_2925 | BSM4216_1114 | Hypothetical protein; Belongs to the UPF0354 family. | Competence protein CoiA. | 0.404 |
| AKP48157.1 | AKP46421.1 | BSM4216_2925 | BSM4216_1121 | Hypothetical protein; Belongs to the UPF0354 family. | YjbH-likeGTP pyrophosphokinase domain. | 0.727 |
| AKP48157.1 | AKP48211.1 | BSM4216_2925 | BSM4216_2979 | Hypothetical protein; Belongs to the UPF0354 family. | 8-oxo-dGTPase Bsu YtkD 8-oxo-GTPase Bsu YtkD; Belongs to the Nudix hydrolase family. | 0.775 |
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