STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP46491.1Hypothetical protein. (426 aa)    
Predicted Functional Partners:
AKP46490.1
Putative transport ATP-binding protein.
  
 0.957
AKP46492.1
Zinc protease; FIG001621.
  
 
 0.882
AKP46493.1
peptidaseM16 family; FIG009210.
  
 
 0.878
AKP46494.1
Hypothetical protein.
  
    0.855
BSM4216_1192
Radical SAM domain heme biosynthesis protein.
  
  
 0.830
AKP46489.1
Hypothetical protein.
       0.773
AKP48235.1
Peptide transport system permease protein SapB.
  
 
 0.585
atpE
ATP synthase C chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.473
BSM4216_1873
Uncharacterized protein.
   
  
 0.448
AKP46917.1
SPFH domain/band 7 family protein.
   
 0.408
Your Current Organism:
Bacillus smithii
NCBI taxonomy Id: 1479
Other names: B. smithii, CCUG 27413, CIP 103790, DSM 4216, IFO 15311, JCM 9076, LMG 12526, LMG:12526, NBRC 15311, NRRL NRS-173
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.