STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKP46547.1Siderophore related permease. (406 aa)    
Predicted Functional Partners:
AKP46548.1
Siderophore synthetase superfamilygroup C Siderophore synthetase componentligase.
 
   
 0.942
AKP46544.1
Siderophore synthetase superfamilygroup A Siderophore synthetase large componentacetyltransferase.
 
   
 0.937
AKP46545.1
Siderophore synthetase small componentacetyltransferase.
 
     0.934
AKP46543.1
Siderophore biosynthesis L-2,4-diaminobutyrate decarboxylase.
 
     0.921
AKP46546.1
Siderophore biosynthesis proteinmonooxygenase.
 
   
 0.919
AKP46542.1
Siderophore biosynthesis diaminobutyrate--2-oxoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.874
AKP46440.1
Hypothetical protein.
  
     0.492
AKP47990.1
Stage II sporulation protein B.
  
     0.487
AKP45997.1
Hypothetical protein.
  
     0.455
AKP48932.1
Phage neck.
  
     0.439
Your Current Organism:
Bacillus smithii
NCBI taxonomy Id: 1479
Other names: B. smithii, CCUG 27413, CIP 103790, DSM 4216, IFO 15311, JCM 9076, LMG 12526, LMG:12526, NBRC 15311, NRRL NRS-173
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