STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsLCell division protein FtsL; Essential cell division protein; Belongs to the FtsL family. (118 aa)    
Predicted Functional Partners:
rsmH
rRNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
  
 0.937
AKP46762.1
Penicillin-binding protein 2B.
 
 
 0.891
mraZ
Cell division protein MraZ; Belongs to the MraZ family.
  
    0.821
AKP46763.1
Cell division protein FtsI Peptidoglycan synthetase.
  
 
 0.774
AKP45873.1
Hypothetical protein.
  
     0.764
AKP47940.1
Hypothetical protein; FIG01227478.
  
    0.753
AKP47899.1
Hypothetical protein.
  
     0.749
AKP47782.1
Late competence protein ComGFaccess of DNA to ComEA; FIG012620.
  
     0.722
AKP45469.1
Cell division protein DivIC.
  
 
 
 0.706
AKP46659.1
Hypothetical protein; FIG01226255.
  
     0.686
Your Current Organism:
Bacillus smithii
NCBI taxonomy Id: 1479
Other names: B. smithii, CCUG 27413, CIP 103790, DSM 4216, IFO 15311, JCM 9076, LMG 12526, LMG:12526, NBRC 15311, NRRL NRS-173
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.