STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSM4216_1659Uncharacterized protein. (134 aa)    
Predicted Functional Partners:
AKP46938.1
Putative aminoglycoside phosphotransferase.
 
     0.816
AKP46939.1
Putative 2-phosphosulfolactate phosphatase; Belongs to the ComB family.
       0.791
AKP46825.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.608
AKP46940.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.567
BSM4216_3125
annotation not available
 
  
 0.511
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.493
AKP46941.1
Long-chain-fatty-acid--CoA ligase.
 
  
 0.485
Your Current Organism:
Bacillus smithii
NCBI taxonomy Id: 1479
Other names: B. smithii, CCUG 27413, CIP 103790, DSM 4216, IFO 15311, JCM 9076, LMG 12526, LMG:12526, NBRC 15311, NRRL NRS-173
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.